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Showing posts with label Berkeley Lab. Show all posts
Showing posts with label Berkeley Lab. Show all posts

Friday, September 29, 2023

Berkeley Lab Awarded Two New Centers to Counter Climate Change

 Berkeley Lab News Release:

Berkeley Lab Awarded Two New Centers to Counter Climate Change

The programs will advance clean hydrogen and carbon sequestration technologies as part of DOE’s Energy Earthshots Initiative
LAUREN BIRON | (510) 621-9370 | SEPTEMBER 29, 2023
The Department of Energy has announced that Berkeley Lab will lead two Energy Earthshot Research Centers. (Credit: Department of Energy)
The Department of Energy’s Lawrence Berkeley National Laboratory (Berkeley Lab) will host two new centers dedicated to advancing clean energy technology and combating climate change. The awards are part of DOE’s Energy Earthshots Initiative that launched in 2021 with the goal of speeding up technological breakthroughs and lowering costs. 

DOE has so far launched seven Earthshots spanning clean energy and carbon reduction technologies. The Berkeley Lab programs announced today will address two of them: the Hydrogen Shot and the Carbon Negative Shot. Each of the new Energy Earthshot Research Centers will receive $19 million over the next four years. 

The Hydrogen Shot aims to reduce the cost of hydrogen to $1 per kilogram of hydrogen (H2) in one decade. Switching from fossil fuels to clean hydrogen will reduce the emissions that cause climate change and local air pollution, and lowering hydrogen’s cost will open the door to use in new areas – including long-duration energy storage, manufacturing, and heavy-duty trucks and buses. But lowering future emissions is not enough to combat greenhouse gases already warming our atmosphere and exacerbating extreme weather events. The Carbon Negative Shot aims to remove carbon dioxide from the atmosphere and store it at large scales for less than $100 per metric ton.

“Our Energy Earthshots are game-changing endeavors to unleash the technologies of the clean energy transition and make them accessible, affordable, and abundant,” said U.S. Secretary of Energy Jennifer M. Granholm. “The Energy Earthshot Research Centers and the related work happening on college campuses around the country will be instrumental in developing the clean energy and decarbonization solutions we need to establish a 100% clean grid and beat climate change.”

Hydrogen Shot: Center for Ionomer-based Water Electrolysis (CIWE)

Berkeley Lab’s Center for Ionomer-based Water Electrolysis (CIWE) will investigate how to improve efficiency and drive down the cost of a process to make hydrogen: “water-splitting electrolysis.”

This kind of electrolysis runs electricity through electrodes to split water into hydrogen and oxygen. The setups for this process often incorporate materials called “ionomers” – polymers that move charged particles (ions) and speed up the reactions that produce hydrogen. But the way these ionomers interact with other electrolyzer components isn't yet well understood, and even subtle changes can cause big swings in how the materials and the electrolyzer behave.

CIWE researchers will use both physical systems and virtual “digital twins” to study these materials and their interfaces. With these approaches, they can closely examine the chemistry, structure, and reactions, greatly expanding the amount of available data for these complex interactions. With that information in hand, researchers aim to develop, optimize, and test new materials and processes in real-world devices. 

“Our goal is to understand what’s happening at the small scale so we can create durable, efficient, and cost-effective hydrogen technologies,” said Adam Weber, the director of CIWE. “If we can boost the use of clean hydrogen, we can slow down climate change and dramatically improve air quality.”

Partners in the center are Oak Ridge National Laboratory, Colorado School of Mines, Texas Tech University, University of Oregon, UC Berkeley, UC Irvine, and UC Merced. 

Carbon Negative Shot: RESTOR-C: Center for Restoration of Soil Carbon by Precision Biological Strategies

Berkeley Lab’s RESTOR-C will cultivate ways for plants and microbes to remove carbon dioxide from the atmosphere and stably store it for more than 100 years in the soil.  

The multi-disciplinary team will span biology, ecology, chemistry, and computer sciences. Researchers will study how carbon is fixed by plants and channeled into the soil, and test plant- and microbe-based strategies at field sites in California and New Mexico. Finally, the center will evaluate how to spread and scale the approaches to additional locations and crops. 

“We know that the soil is a vast potential reservoir to store carbon pulled out of our warming atmosphere by plants,” said Susannah Tringe, the director of RESTOR-C. “With the right method, we can potentially accumulate carbon in agricultural lands across the United States and move toward a carbon negative future.”

Partners in the center are Los Alamos National Laboratory, New Mexico State University, UC Berkeley, UC San Diego, and California State University Monterey Bay.
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Founded in 1931 on the belief that the biggest scientific challenges are best addressed by teams, Lawrence Berkeley National Laboratory and its scientists have been recognized with 16 Nobel Prizes. Today, Berkeley Lab researchers develop sustainable energy and environmental solutions, create useful new materials, advance the frontiers of computing, and probe the mysteries of life, matter, and the universe. Scientists from around the world rely on the Lab’s facilities for their own discovery science. Berkeley Lab is a multiprogram national laboratory, managed by the University of California for the U.S. Department of Energy's Office of Science.
 
DOE's Office of Science is the single largest supporter of basic research in the physical sciences in the United States, and is working to address some of the most pressing challenges of our time. For more information, please visit energy.gov/science.

Thursday, July 27, 2023

Making Renewable, Infinitely Recyclable Plastics Using Bacteria

 Berkeley Lab News Release:


Scientists engineered microbes to make the ingredients for recyclable plastics – replacing finite, polluting petrochemicals with sustainable alternatives. The new approach shows that renewable, recyclable plastics are not only possible, but also outperform those from petrochemicals
LAUREN BIRON | (510) 621-9370 | JULY 27, 2023
Researchers at Berkeley Lab have used bacteria to bring biorenewability to recyclable plastics. (Credit: Jenny Nuss/Berkeley Lab)
Plastic waste is a problem. Most plastics can’t be recycled, and many use finite, polluting petrochemicals as the basic ingredients. But that’s changing. In a study published today in Nature Sustainability, researchers successfully engineered microbes to make biological alternatives for the starting ingredients in an infinitely recyclable plastic known as poly(diketoenamine), or PDK.

The finding comes from collaboration among experts at three facilities at the Department of Energy’s Lawrence Berkeley National Laboratory (Berkeley Lab): the Molecular Foundry, the Joint BioEnergy Institute (JBEI), and the Advanced Light Source. 

“This is the first time that bioproducts have been integrated to make a PDK that is predominantly bio-based,” said Brett Helms, staff scientist at the Molecular Foundry who led the project. “And it’s the first time that you see a bio-advantage over using petrochemicals, both with respect to the material’s properties and the cost of producing it at scale.”

Unlike traditional plastics, PDK can be repeatedly deconstructed into pristine building blocks and formed into new products with no loss in quality. PDKs initially used building blocks derived from petrochemicals, but those ingredients can be redesigned and produced with microbes instead. Now, after four years of effort, collaborators have manipulated E. coli to turn sugars from plants into some of the starting materials – a molecule known as triacetic acid lactone, or bioTAL – and produced a PDK with roughly 80% bio-content.

“We’ve demonstrated that the pathway to 100% bio-content in recyclable plastics is feasible,” said Jeremy Demarteau, a project scientist on the team contributing to biopolymer development. “You’ll see that from us in the future.”
PDKs can be used for a variety of products, including adhesives, flexible items like computer cables or watch bands, building materials, and “tough thermosets,” rigid plastics made through a curing process. Researchers were surprised to find that incorporating the bioTAL into the material expanded its working temperature range by up to 60 degrees Celsius compared to the petrochemical version. This opens the door to using PDKs in items that need specific working temperatures, including sports gear and automotive parts such as bumpers or dashboards.
Raw bioTAL (left) can be combined with other chemicals and processed into a biorenewable, recyclable PDK plastic (right). (Credit: Jeremy Demarteau/Berkeley Lab)
Solving the plastic waste problem

The United Nations Environment Program estimates that we globally produce about 400 million tons of plastic waste every year, and that number is predicted to climb to more than 1 billion tons by 2050. Of the 7 billion tons of plastic waste already created, only about 10 percent has been recycled, while most is discarded into landfills or burned. 

“We can’t keep using our dwindling supply of fossil fuels to feed this insatiable desire for plastics,” said Jay Keasling, a professor at UC Berkeley, senior faculty scientist in Berkeley Lab’s Biosciences Area, and the CEO of JBEI. “We want to help solve the plastic waste problem by creating materials that are both biorenewable and circular – and providing an incentive for companies to use them. Then people could have the products they need for the time they need them, before those items are transformed into something new.”

The study released today also builds on a 2021 environmental and technological analysis, which showed that PDK plastic could be commercially competitive with conventional plastics if produced at a large scale.

“Our new results are extremely encouraging,” said Corinne Scown, a staff scientist in Berkeley Lab’s Energy Technologies Area and a vice president at JBEI. “We found that with even modest improvements to the production process, we could soon be making bio-based PDK plastics that are both cheaper and emit less CO2 than those made with fossil fuels.” 

Those improvements would include speeding up the rate at which microbes convert sugars to bioTAL, using bacteria that can transform a wider variety of plant-derived sugars and other compounds, and powering the facility with renewable energy. 

This work was supported by the Department of Energy’s Bioenergy Technologies Office. The Molecular Foundry is a DOE Office of Science, Office of Basic Energy Sciences user facility that specializes in nanoscale science. JBEI is a Bioenergy Research Center funded by DOE’s Office of Science. The Advanced Light Source is a DOE Office of Science user facility.

PDK technology is available for licensing and collaboration. If interested, please contact Berkeley Lab’s Intellectual Property Office, ipo@lbl.gov.
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Founded in 1931 on the belief that the biggest scientific challenges are best addressed by teams, Lawrence Berkeley National Laboratory and its scientists have been recognized with 16 Nobel Prizes. Today, Berkeley Lab researchers develop sustainable energy and environmental solutions, create useful new materials, advance the frontiers of computing, and probe the mysteries of life, matter, and the universe. Scientists from around the world rely on the Lab’s facilities for their own discovery science. Berkeley Lab is a multiprogram national laboratory, managed by the University of California for the U.S. Department of Energy's Office of Science.
 
DOE's Office of Science is the single largest supporter of basic research in the physical sciences in the United States, and is working to address some of the most pressing challenges of our time. For more information, please visit energy.gov/science.

Friday, June 16, 2023

Photosynthesis, Key to Life on Earth, Starts with a Single Photon

 Berkeley Lab News Release:

A cutting-edge experiment has revealed the quantum dynamics of one of nature’s most crucial processes
(Jenny Nuss/Berkeley Lab)
Using a complex cast of metal-studded pigments, proteins, enzymes, and co-enzymes, photosynthetic organisms can convert the energy in light into the chemical energy for life. And now, thanks to a study published today in Nature, we know that this organic chemical reaction is sensitive to the smallest quantity of light possible – a single photon.

The discovery solidifies our current understanding of photosynthesis and will help answer questions about how life works on the smallest of scales, where quantum physics and biology meet. 

“A huge amount of work, theoretically and experimentally, has been done around the world trying to understand what happens after a photon is absorbed. But we realized that nobody was talking about the first step. That was still a question that needed to be answered in detail,” said co-lead author Graham Fleming, a senior faculty scientist in the Biosciences Area at Lawrence Berkeley National Laboratory (Berkeley Lab) and professor of chemistry at UC Berkeley. 

In their study, Fleming, co-lead author Birgitta Whaley, a senior faculty scientist in the Energy Sciences Area at Berkeley Lab, and their research groups showed that a single photon can indeed initiate the first step of photosynthesis in photosynthetic purple bacteria. Because all photosynthetic organisms use similar processes and share an evolutionary ancestor, the team is confident that photosynthesis in plants and algae works the same way. “Nature invented a very clever trick,” Fleming said. 

How living systems use light

Based on how efficient photosynthesis is at converting sunlight into energy-rich molecules, scientists have long assumed that a single photon was all it took to initiate the reaction, wherein photons pass energy to electrons that then trade places with electrons in different molecules, eventually creating the precursor ingredients for the production of sugars. After all, the sun doesn’t provide that many photons – only a thousand photons arrive at a single chlorophyll molecule per second on a sunny day – yet the process occurs reliably across the planet. 

However, “no one had ever backed up that assumption with a demonstration,” said first author Quanwei Li, a joint postdoctoral researcher who develops new experimental techniques with quantum light in the Fleming and Whaley groups.

And, further complicating matters, a great deal of the research that has unraveled precise details about later steps of photosynthesis was performed by triggering photosynthetic molecules with powerful, ultra-fast laser pulses.

“There’s a huge difference in intensity between a laser and sunlight – a typical focused laser beam is a million times brighter than sunlight,” said Li. Even if you manage to produce a weak beam with an intensity matching that of sunlight, they are still very different due to quantum properties of light called photon statistics. Since no one has seen the photon get absorbed, we don’t know what difference it makes what kind of photon it is, he explained. “But just like you need to understand each particle to build a quantum computer, we need to study the quantum properties of living systems to truly understand them, and to make efficient artificial systems that generate renewable fuels.”

Photosynthesis, like other chemical reactions, was first understood in bulk – meaning that we knew what the overall inputs and outputs were, and from that we could infer what interactions between individual molecules might look like. In the 1970s and 80s, advances in technology allowed scientists to directly study individual chemicals during reactions. Now, scientists are beginning to explore the next frontier, the individual atom and subatomic particle scale, using even more advanced technologies.

From assumption to fact

Designing an experiment that would allow for observation of individual photons meant bringing together a unique team of theorists and experimentalists who combined cutting-edge tools from quantum optics and biology. “It was new for people who study photosynthesis, because they don’t normally use these tools, and it was new for people in quantum optics because we don’t normally think about applying these techniques to complex biological systems,” said Whaley, who is also a professor of chemical physics at UC Berkeley.

The scientists set up a photon source that generates a single pair of photons through a process called spontaneous parametric down-conversion. During each pulse, the first photon – “the herald” – was observed with a highly sensitive detector, which confirmed that the second photon was on its way to the assembled sample of light absorbing molecular structures taken from photosynthetic bacteria. Another photon detector near the sample was set up to measure the lower-energy photon that is emitted by the photosynthetic structure after it absorbed the second “heralded” photon of the original pair. 

The light absorbing structure used in the experiment, called the LH2, has been studied extensively. It is known that photons at the 800 nanometer (nm) wavelength get absorbed by a ring of 9 bacteriochlorophyll molecules in LH2, causing energy to be passed to a second ring of 18 bacteriochlorophyll molecules which can emit fluorescent photons at 850 nm. In the native bacteria, the energy from the photons would continue transferring to subsequent molecules until it is used to initiate the chemistry of photosynthesis. But in the experiment, when the LH2s had been separated from other cellular machinery, the detection of the 850 nm photon served as definitive sign that the process had been activated.

“If you've only got one photon, it's awfully easy to lose it. So that was the fundamental difficulty in this experiment and that’s why we use the herald photon,” said Fleming. The scientists analyzed more than 17.7 billion herald photon detection events and 1.6 million heralded fluorescent photon detection events to ensure that the observations could only be attributed to single-photon absorption, and that no other factors were influencing the results.  

“I think the first thing is that this experiment has shown that you can actually do things with individual photons. So that's a very, very important point,” said Whaley. “The next thing is, what else can we do? Our goal is to study the energy transfer from individual photons through the photosynthetic complex at the shortest possible temporal and spatial scales.”
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Founded in 1931 on the belief that the biggest scientific challenges are best addressed by teams, Lawrence Berkeley National Laboratory and its scientists have been recognized with 16 Nobel Prizes. Today, Berkeley Lab researchers develop sustainable energy and environmental solutions, create useful new materials, advance the frontiers of computing, and probe the mysteries of life, matter, and the universe. Scientists from around the world rely on the Lab’s facilities for their own discovery science. Berkeley Lab is a multiprogram national laboratory, managed by the University of California for the U.S. Department of Energy's Office of Science.
 
DOE's Office of Science is the single largest supporter of basic research in the physical sciences in the United States, and is working to address some of the most pressing challenges of our time. For more information, please visit energy.gov/science.

Wednesday, May 3, 2023

Researchers Capture Elusive Missing Step in Photosynthesis

 Berkeley Lab News Release:


After decades of effort, scientists have finally seen the process by which nature creates the oxygen we breathe 
MEDIA RELATIONS | MAY 3, 2023
Using SLAC’s X-ray laser, researchers have finally seen the process by which nature creates the oxygen we breathe. (Greg Stewart/SLAC National Accelerator Laboratory

Photosynthesis plays a crucial role in shaping and sustaining life on Earth, yet many aspects of the process remain a mystery. One such mystery is how photosystem II, a protein complex in plants, algae and cyanobacteria, harvests energy from sunlight and uses it to split water, producing the oxygen we breathe. Now researchers from Lawrence Berkeley National Laboratory (Berkeley Lab) and SLAC National Accelerator Laboratory, together with collaborators from Uppsala University and Humboldt University and other institutions have succeeded in cracking a key secret of photosystem II.

Using SLAC’s Linac Coherent Light Source (LCLS) and the SPring-8 Angstrom Compact free electron LAser (SACLA) in Japan, they captured for the first time in atomic detail what happens in the final moments leading up to the release of breathable oxygen. The data reveal an intermediate reaction step that had not been observed before.

The results, published today in Nature, shed light on how nature has optimized photosynthesis and are helping scientists develop artificial photosynthetic systems that mimic photosynthesis to harvest natural sunlight to convert carbon dioxide into hydrogen and carbon based-fuels.

“The more we learn about how nature does it, the closer we get to using those same principles in human-made processes, including ideas for artificial photosynthesis as a clean and sustainable energy source,” said co-author Jan Kern, a staff scientist in Berkeley Lab’s Biosciences Area.

Co-author Junko Yano, a senior scientist who is also at Berkeley Lab, said, “Photosystem II is giving us the blueprint for how to optimize our clean energy sources and avoid dead ends and dangerous side products that damage the system. What we once thought was just fundamental science could become a promising avenue to improving our energy technologies.”

Bases loaded

During photosynthesis, photosystem II’s oxygen-evolving center – a cluster of four manganese atoms and one calcium atom connected by oxygen atoms – facilitates a series of challenging chemical reactions that act to split apart a water molecule to release molecular oxygen. 

The center cycles through four stable oxidation states, known as S0 through S3, when exposed to sunlight. On a baseball field, S0 would be the start of the game when a player on home base is ready to go to bat. S1-S3 would be players on first, second, and third. Every time a batter connects with a ball, or the complex absorbs a photon of sunlight, the player on the field advances one base. When the fourth ball is hit, the player slides into home, scoring a run or, in the case of photosystem II, releasing one molecule of breathable oxygen. 

The researchers examined this center by exciting tiny samples of photosynthetic molecules from cyanobacteria with optical light then probed the molecules with ultrafast X-ray pulses from LCLS and SACLA, using a bespoke conveyor belt-inspired instrument designed by co-first authors Isabel Bogacz and Philipp Simon. The X-ray diffraction data revealed the atomic structure of the cluster and the chemical process around it.
In photosystem II, the water-splitting center cycles through four stable states, S0-S3. On a baseball field, S0 would be the start of the game when a batter on home base is ready to hit. S1-S3 would be players waiting on first, second, and third. The center gets bumped up to the next state every time it absorbs a photon of sunlight, just like how a player on the field advances one base every time a batter connects with a ball. When the fourth ball is hit, the player slides into home, scoring a run or, in the case of Photosystem II, releasing the oxygen we breathe. (Greg Stewart/SLAC National Accelerator Laboratory)
A homerun

Using this technique, the scientists for the first time imaged the mad dash for home – the transient state, or S4, where two atoms of oxygen bond together and an oxygen molecule is released. The data showed that there are additional steps in this reaction that had never been seen before.

“Other experts argued that this is something that could never be captured,” said co-author Uwe Bergmann, a professor at the University of Wisconsin-Madison. “It’s really going to change the way we think about photosystem II. Although we can't say we have a unique mechanism based on the data yet, we can exclude some models and ideas people have proposed over the last few decades. It’s the closest anyone has ever come to capturing this final step and showing how this process works with actual structural data.”

The new study is the latest in a series undertaken by the team over the past decade. Earlier work focused on observing various steps of the photosynthetic cycle at the temperature at which it occurs in nature.

“Most of the process that produces breathable oxygen happens in this last step,” said co-author Vittal Yachandra, a senior scientist at Berkeley Lab. “But there are several things happening at different parts of photosystem II and they all have to come together in the end for the reaction to succeed. Just like how in baseball, factors like the location of the ball and the position of the basemen and fielders affect the moves a player takes to get to home base, the protein environment around the catalytic center influences how this reaction plays out.”

Brighter X-rays for a brighter future

Based on these results, the researchers plan to conduct experiments designed to capture many more snapshots of the process.

“There are still things happening in between that we could not catch yet,” Kern said. “There are more snapshots we really want to take which would bridge the remaining gaps and tell the whole story.”

To do so, they need to push the quality of their data even further. In the past, these types of measurements proved challenging because the X-ray signals from the samples are faint and the rates at which existing X-ray lasers like LCLS and SACLA produce X-ray pulses are too small.

“It took quite some effort to optimize the setup, so we couldn't collect all the data we needed for this one publication in a single experiment,” said co-author and SLAC scientist Roberto Alonso-Mori. “These results actually include data taken over six years.” 

After gathering all the data, it was another challenge to analyze it and piece together structural maps of the molecules as they change during the reaction. This work was made possible by special software developed for data merging developed by co-authors Nicholas Sauter and Aaron Brewster, and programs for structure determination by co-author Paul Adams, the Associate Laboratory Director for Biosciences at Berkeley Lab. The data analysis was performed by co-first authors Asmit Bhowmick, Rana Hussein of Humboldt University, Isabel Bogacz, and Philipp Simon.

When an LCLS upgrade, called LCLS-II, comes online later this year, the repetition rate will skyrocket from 120 pulses per second to up to a million per second. 

“With these upgrades, we will be able to collect several days’ worth of data in just a few hours,” Bergmann said. “We will also be able to use soft X-rays to further understand the chemical changes happening in the system. These new capabilities will continue to drive this research forward and shed new light on photosynthesis.”
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Founded in 1931 on the belief that the biggest scientific challenges are best addressed by teams, Lawrence Berkeley National Laboratory and its scientists have been recognized with 16 Nobel Prizes. Today, Berkeley Lab researchers develop sustainable energy and environmental solutions, create useful new materials, advance the frontiers of computing, and probe the mysteries of life, matter, and the universe. Scientists from around the world rely on the Lab’s facilities for their own discovery science. Berkeley Lab is a multiprogram national laboratory, managed by the University of California for the U.S. Department of Energy's Office of Science.
 
DOE's Office of Science is the single largest supporter of basic research in the physical sciences in the United States, and is working to address some of the most pressing challenges of our time. For more information, please visit energy.gov/science.